Gene mutations that helped mammoths tolerate cold identified

New York: Gene mutations that possibly helped ancient mammoths survive the extreme cold have been identified by scientists, including one of Indian origin.

Researchers from Columbia University in the US captured close-up views of TRPV3, a skin-cell ion channel that plays important roles in sensing temperature, itch, and pain. In humans, defects in the protein can lead to skin diseases such as atopic dermatitis (a type of eczema), vitiligo (uneven skin coloration), and skin cancer.

"This study gives scientists a template they can use to design more effective drugs for treating these skin-related illnesses," said Appu Singh, a postdoctoral fellow at the Sobolevsky lab.

All vertebrate DNA, including the woolly mammoth genome, contains the TRPV3 gene. Though the mammoths lived in extremely cold environments, they descended from elephants that lived in the tropics.

Researchers think that changes in the TRPV3 genes of mammoths may have helped them withstand lower temperatures. They used a powerful imaging technique called cryo-electron microscopy to take pictures of TRPV3 molecules. Initial 2D images were collected by freezing the molecules in an extremely thin, clear layer of ice and bombarding them with electrons.

The researchers then used computational tools to convert the 2D images into detailed molecular 3D models. Mutations in this molecule may have helped mammoths tolerate the cold.

Human TRPV3 in the closed and open states viewed from outside the cell. This is the first time scientists have gotten a glimpse of TRPV3 in atomic detail. The researchers were able to get images of the protein in two states, revealing how the channel opens and closes to let ions flow into skin cells.

This exchange of ions prompts the body to react to sensations such as pain, itchiness, and changes in temperature. The group also discovered how a small molecule with anti-cancer properties called 2-APB interacts with and controls the function of this channel.

The structures in this study provide clues about how mutations in TRPV3 affect the channel's ability to sense temperature and show that lipids molecules that make up most of the cell membrane contact the channel in several regions. Mammoth TRPV3 contains a mutation in one of these lipid-touching regions.

"Temperature affects the interaction of lipids and proteins, a mutation in the woolly mammoth channel would most likely affect this interaction and could explain how these animals adapted to their cold environment,"  said Alexander Sobolevsky from Columbia University.

Researchers will use the structure to investigate how atomic changes to the protein cause it to malfunction in human diseases.